Skip to content

Conventions

Conventions used within the recipes

These are the types of boxes available to provide additional information along the main content of the recipe:

Boxes

This is a supplementary piece of information

This is a tip to help you running any tool or pipeline

This is how the console output should look like

This is a warning about a potential problem

These are directory contents

This is an explanation about a common bug/error

This is a piece of code

This is a link to external learning material

This is to reference to a specific person or group

This is to clarify the applicable license

This to give credit to someone

Code

This how commands to run in the terminal looks like:

run anytool -parameters

This is how to display the content of a given script with a highlight in specific line:

hello-world.py
1
2
3
    import os

    print("hello world")

This is how to display the code in a given script before and after of making any modification:

hello-world.py
1
2
3
import os

print("hello world")
hello-world.py
1
2
3
import os

print("hola mundo")

Images

This is how to place images within the recipe:

Metagenomics